mudata.to_anndata

mudata.to_anndata(mdata, **kwargs)

Convert MuData to AnnData by concatenating modalities.

If mdata.axis == 0 (shared observations), concatenate modalities along axis 1 (anndata.concat(axis=1)). If mdata.axis == 1 (shared variables), concatenate datasets along axis 0 (anndata.concat(axis=0)).

Parameters:

• data – Object to convert to AnnData.

• **kwargs – Additional arguments for anndata.concat().

Return type:

AnnData